Saccharopolyspora rhizosphaerae strain H219

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharopolyspora

Description

Saccharopolyspora rhizosphaerae strain H219 is a Gram-positive bacterium characterized by a single replicon. The organism has been assigned the accession number RSAA00000000.1, which serves as a unique identifier for its genomic information. As a member of the genus Saccharopolyspora, this strain is likely to exhibit traits typical of this group, which is known for its saprophytic lifestyle and ability to thrive in soil environments. The Gram-positive nature of Saccharopolyspora rhizosphaerae suggests a thick peptidoglycan layer in its cell wall, which is a characteristic contributing to the organism's structural integrity and potential resilience in various ecological niches. The presence of a single replicon indicates a streamlined genetic organization, which may confer advantages in terms of replication efficiency and adaptability. This feature is particularly relevant for bacteria inhabiting complex environments, such as the rhizosphere, where competition and resource availability can fluctuate. In summary, the traits of Saccharopolyspora rhizosphaerae strain H219, including its Gram-positive status and single replicon, suggest it may play a role in nutrient cycling and soil health. Its characteristics align with the ecological functions typically associated with soil-dwelling bacteria, potentially contributing to plant-microbe interactions and overall ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharopolyspora
SpeciesSaccharopolyspora rhizosphaerae
Strainstrain H219

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharopolyspora rhizosphaerae strain H219 scaffold36_cov25,

Gene Summary

Adenine Count

858683 bp

Thymine Count

852139 bp

Guanine Count

2037522 bp

Cytosine Count

2076661 bp

Genome Length

5827609 bp

Protein-coding Genes

5142 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-binding s4 domain-containing proteinEIL87_19565Not AvailablePositive4284045 - 42842607772.3
iron-sulfur cluster assembly accessory proteinEIL87_19570Not AvailableNegative4284339 - 428470112848.9
duf3043 domain-containing proteinEIL87_19575Not AvailablePositive4284913 - 428555124684.3
glycerol dehydrogenaseEIL87_19580Not AvailablePositive4285691 - 428683639511.7
cytidine deaminaseEIL87_19585Not AvailableNegative4286841 - 428738619390.0
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseEIL87_19590Not AvailablePositive4287385 - 428800221346.2
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseEIL87_19595Not AvailablePositive4288051 - 428912436722.0
adenosylcobinamide-gdp ribazoletransferaseEIL87_19600Not AvailablePositive4289124 - 428986124620.8
branched-chain amino acid aminotransferaseEIL87_19605Not AvailableNegative4289935 - 429103840019.3
hypothetical proteinEIL87_19610Not AvailablePositive4291174 - 429147010321.7

Displaying genes 3821 – 3830 of 5198 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.