Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polaris |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium polaris strain F109 KHDHEBDM_60
Accession NumberRRYS00000000.1
Gene Summary
Adenine Count
1179714 bp
Thymine Count
1155909 bp
Guanine Count
1234829 bp
Cytosine Count
1288784 bp
Genome Length
4863594 bp
Protein-coding Genes
4176 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | KHDHEBDM_00491 | Not Available | + | 505846 - 507423 | 56886.5 |
| amino acid abc transporter substrate-binding protein | KHDHEBDM_00492 | Not Available | + | 507426 - 508481 | 37369.9 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | KHDHEBDM_00493 | Not Available | - | 508512 - 508904 | 14304.2 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase subunit e | KHDHEBDM_00494 | Not Available | - | 508904 - 509245 | 12665.2 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | KHDHEBDM_00495 | Not Available | - | 509242 - 510912 | 62616.6 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase arnd | KHDHEBDM_00496 | Not Available | - | 510930 - 511823 | 33485.9 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | KHDHEBDM_00497 | Not Available | - | 511820 - 513838 | 75281.9 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | KHDHEBDM_00498 | Not Available | - | 513835 - 514818 | 36507.7 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | KHDHEBDM_00499 | Not Available | - | 514811 - 515959 | 42009.8 |
| udp-glucose 6-dehydrogenase | KHDHEBDM_00500 | Not Available | - | 516180 - 517346 | 43889.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.