Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polaris |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium polaris strain F109 KHDHEBDM_60
Accession NumberRRYS00000000.1
Gene Summary
Adenine Count
1179714 bp
Thymine Count
1155909 bp
Guanine Count
1234829 bp
Cytosine Count
1288784 bp
Genome Length
4863594 bp
Protein-coding Genes
4176 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gsph | KHDHEBDM_00441 | Not Available | - | 457646 - 458260 | 23061.7 |
| type ii secretion system protein gspg | KHDHEBDM_00442 | Not Available | - | 458313 - 458783 | 17382.7 |
| type ii secretion system protein gspf | KHDHEBDM_00443 | Not Available | - | 458816 - 460042 | 45141.8 |
| type ii secretion system protein gspe | KHDHEBDM_00444 | Not Available | - | 460044 - 461540 | 55279.0 |
| type ii secretion system protein gspd | KHDHEBDM_00445 | Not Available | - | 461537 - 463630 | 76074.9 |
| type ii secretion system protein gspc | KHDHEBDM_00446 | Not Available | - | 463584 - 464447 | 31078.8 |
| exo-poly-alpha-d-galacturonosidase | KHDHEBDM_00447 | Not Available | - | 464498 - 466477 | 71897.2 |
| pectate lyase | KHDHEBDM_00448 | Not Available | - | 466616 - 468184 | 57022.2 |
| general secretion pathway protein | KHDHEBDM_00449 | Not Available | + | 468714 - 469283 | 20321.7 |
| general secretion pathway protein | KHDHEBDM_00450 | Not Available | - | 469280 - 469693 | 14536.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.