Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polaris |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium polaris strain F109 KHDHEBDM_60
Accession NumberRRYS00000000.1
Gene Summary
Adenine Count
1179714 bp
Thymine Count
1155909 bp
Guanine Count
1234829 bp
Cytosine Count
1288784 bp
Genome Length
4863594 bp
Protein-coding Genes
4176 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hcp1 family type vi secretion system effector | KHDHEBDM_04357 | Not Available | + | 4816045 - 4816449 | 15095.0 |
| type iv secretion protein rhs | KHDHEBDM_04358 | Not Available | + | 4816670 - 4818706 | 75032.0 |
| phospholipase | KHDHEBDM_04359 | Not Available | + | 4818716 - 4820086 | 46392.1 |
| ankyrin repeat protein | KHDHEBDM_04360 | Not Available | + | 4820167 - 4820865 | 25410.1 |
| type iv secretion protein rhs | KHDHEBDM_04361 | Not Available | + | 4821742 - 4823913 | 81343.7 |
| hypothetical protein | KHDHEBDM_04362 | Not Available | + | 4823883 - 4824311 | 16310.1 |
| type iv secretion protein rhs | KHDHEBDM_04363 | Not Available | + | 4824548 - 4825066 | 19665.3 |
| hypothetical protein | KHDHEBDM_04364 | Not Available | + | 4825063 - 4825437 | 14058.0 |
| hypothetical protein | KHDHEBDM_04365 | Not Available | + | 4825518 - 4826291 | 29574.2 |
| udp-n-acetylenolpyruvoylglucosamine reductase | KHDHEBDM_04367 | Not Available | + | 4827198 - 4828235 | 38410.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.