Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polaris |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium polaris strain F109 KHDHEBDM_60
Accession NumberRRYS00000000.1
Gene Summary
Adenine Count
1179714 bp
Thymine Count
1155909 bp
Guanine Count
1234829 bp
Cytosine Count
1288784 bp
Genome Length
4863594 bp
Protein-coding Genes
4176 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hrp pili protein hrpa | KHDHEBDM_04024 | Not Available | - | 4488031 - 4488237 | 6841.06 |
| diguanylate phosphodiesterase | KHDHEBDM_04025 | Not Available | + | 4488575 - 4490179 | 60169.8 |
| atpase aaa | KHDHEBDM_04026 | Not Available | - | 4490278 - 4491360 | 40106.7 |
| dna-binding response regulator | KHDHEBDM_04027 | Not Available | - | 4491729 - 4492370 | 23399.8 |
| histidine kinase | KHDHEBDM_04028 | Not Available | - | 4492407 - 4493873 | 55742.9 |
| rna polymerase sigma factor | KHDHEBDM_04029 | Not Available | - | 4494118 - 4494663 | 20946.2 |
| sepl/tyea/hrpj family type iii secretion system gatekeeper | KHDHEBDM_04030 | Not Available | + | 4494991 - 4496199 | 44202.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | KHDHEBDM_04031 | Not Available | + | 4496196 - 4498298 | 77589.7 |
| type iii secretion protein | KHDHEBDM_04032 | Not Available | + | 4498308 - 4499237 | 33811.3 |
| escn/yscn/hrcn family type iii secretion system atpase | KHDHEBDM_04033 | Not Available | + | 4499237 - 4500604 | 49226.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.