Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polaris |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium polaris strain F109 KHDHEBDM_60
Accession NumberRRYS00000000.1
Gene Summary
Adenine Count
1179714 bp
Thymine Count
1155909 bp
Guanine Count
1234829 bp
Cytosine Count
1288784 bp
Genome Length
4863594 bp
Protein-coding Genes
4176 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose-1-phosphate isomerase | KHDHEBDM_03893 | Not Available | - | 4314755 - 4315783 | 36786.3 |
| s-methyl-5-thioribose kinase | KHDHEBDM_03894 | Not Available | + | 4315919 - 4317121 | 44195.4 |
| hnh endonuclease | KHDHEBDM_03895 | Not Available | - | 4317187 - 4317537 | 13336.6 |
| acyl-coa dehydrogenase | KHDHEBDM_03896 | Not Available | - | 4317813 - 4320260 | 89103.2 |
| phosphoheptose isomerase | KHDHEBDM_03897 | Not Available | + | 4320610 - 4321191 | 20790.8 |
| class ii glutamine amidotransferase | KHDHEBDM_03898 | Not Available | + | 4321241 - 4322008 | 28937.6 |
| transpeptidase | KHDHEBDM_03899 | Not Available | - | 4321979 - 4322713 | 27918.5 |
| sam-dependent methyltransferase | KHDHEBDM_03900 | Not Available | - | 4322984 - 4323754 | 28314.6 |
| transcriptional regulator | KHDHEBDM_03901 | Not Available | + | 4323987 - 4324787 | 29897.6 |
| dna polymerase iv | KHDHEBDM_03902 | Not Available | + | 4324863 - 4325921 | 40264.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.