Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polaris |
| Strain | strain F109 KHDHEBDM_60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179714 bp
Thymine Count
1155909 bp
Guanine Count
1234829 bp
Cytosine Count
1288784 bp
Genome Length
4863594 bp
Protein-coding Genes
4176 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| subtype i-f crispr-associated endonuclease cas1 | KHDHEBDM_02489 | Not Available | Positive | 2730170 - 2731150 | 36088.0 |
| type i-f crispr-associated helicase cas3 | KHDHEBDM_02490 | Not Available | Positive | 2731147 - 2734443 | 124476.0 |
| type i-f crispr-associated protein csy1 | KHDHEBDM_02491 | Not Available | Positive | 2734467 - 2735801 | 50410.1 |
| type i-f crispr-associated protein csy2 | KHDHEBDM_02492 | Not Available | Positive | 2735798 - 2736730 | 34853.3 |
| crispr-associated protein csy3 | KHDHEBDM_02493 | Not Available | Positive | 2736744 - 2737754 | 36590.1 |
| type i-f crispr-associated endoribonuclease cas6/csy4 | KHDHEBDM_02494 | Not Available | Positive | 2737764 - 2738318 | 20332.4 |
| pin domain nuclease | KHDHEBDM_02495 | Not Available | Negative | 2739364 - 2739765 | 14550.8 |
| abrb/maze/spovt family dna-binding domain-containing protein | KHDHEBDM_02496 | Not Available | Negative | 2739777 - 2740004 | 8908.6 |
| hypothetical protein | KHDHEBDM_02497 | Not Available | Negative | 2740834 - 2741253 | 15807.9 |
| abc-atpase uvra | KHDHEBDM_02498 | Not Available | Negative | 2741269 - 2744103 | 104253.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
