Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polaris |
| Strain | strain F109 KHDHEBDM_60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179714 bp
Thymine Count
1155909 bp
Guanine Count
1234829 bp
Cytosine Count
1288784 bp
Genome Length
4863594 bp
Protein-coding Genes
4176 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrna interferase higb | KHDHEBDM_02258 | Not Available | Negative | 2469387 - 2469698 | 12451.0 |
| type i-e crispr-associated endoribonuclease cas2 | KHDHEBDM_02259 | Not Available | Negative | 2473185 - 2473478 | 11106.4 |
| subtype i-e crispr-associated endonuclease cas1 | KHDHEBDM_02260 | Not Available | Negative | 2473479 - 2474396 | 33200.2 |
| type i-e crispr-associated protein cas6/cse3/case | KHDHEBDM_02261 | Not Available | Negative | 2474424 - 2475071 | 24386.1 |
| type i-e crispr-associated protein cas5/casd | KHDHEBDM_02262 | Not Available | Negative | 2475071 - 2475805 | 27702.7 |
| type i-e crispr-associated protein cas7/cse4/casc | KHDHEBDM_02263 | Not Available | Negative | 2475815 - 2476882 | 38953.9 |
| type i-e crispr-associated protein cse2/casb | KHDHEBDM_02264 | Not Available | Negative | 2476886 - 2477533 | 24092.5 |
| type i-e crispr-associated protein cse1/casa | KHDHEBDM_02265 | Not Available | Negative | 2477526 - 2479085 | 58256.3 |
| transcriptional regulator | KHDHEBDM_02266 | Not Available | Positive | 2479947 - 2480420 | 17817.1 |
| crispr-associated helicase/endonuclease cas3 | KHDHEBDM_02267 | Not Available | Negative | 2480410 - 2483127 | 101873.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
