Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polaris |
| Strain | strain F109 KHDHEBDM_60 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179714 bp
Thymine Count
1155909 bp
Guanine Count
1234829 bp
Cytosine Count
1288784 bp
Genome Length
4863594 bp
Protein-coding Genes
4176 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | KHDHEBDM_00965 | Not Available | Positive | 1027551 - 1029158 | 59540.8 |
| thiamine abc transporter atp-binding protein | KHDHEBDM_00966 | Not Available | Positive | 1029145 - 1029855 | 26079.6 |
| xylan 1,4-beta-xylosidase | KHDHEBDM_00967 | Not Available | Negative | 1029860 - 1031482 | 60197.2 |
| acetolactate synthase catalytic subunit | KHDHEBDM_00968 | Not Available | Positive | 1032015 - 1033679 | 59209.6 |
| acetolactate synthase isozyme 1 small subunit | KHDHEBDM_00969 | Not Available | Positive | 1033685 - 1033996 | 11818.3 |
| membrane protein | KHDHEBDM_00970 | Not Available | Negative | 1034031 - 1034801 | 28601.2 |
| sensor domain-containing diguanylate cyclase | KHDHEBDM_00971 | Not Available | Positive | 1035154 - 1036812 | 62286.3 |
| dna polymerase ii | KHDHEBDM_00972 | Not Available | Positive | 1036934 - 1039300 | 90434.1 |
| rna polymerase-associated protein rapa | KHDHEBDM_00973 | Not Available | Positive | 1039486 - 1042389 | 109771.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | KHDHEBDM_00974 | Not Available | Positive | 1042558 - 1043211 | 24471.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
