Pseudoxanthomonas sp. SGD-10 1090

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas sp. SGD-10 1090 is characterized as a rod-shaped bacterium. It possesses a single replicon, which suggests a streamlined genomic organization potentially advantageous for its adaptability and survival in various environments. The genomic data for this organism is cataloged under the accession number RRYL00000000.1, providing a reference for researchers interested in its genetic characteristics and potential applications. The rod shape of Pseudoxanthomonas sp. SGD-10 1090 may influence its motility and interaction with its environment, allowing it to navigate through diverse substrates and possibly engage in various ecological roles. Rod-shaped bacteria are often associated with efficient nutrient uptake and can be found in numerous habitats, indicating a potential versatility in ecological niches. Investigating the traits of Pseudoxanthomonas sp. SGD-10 1090 could provide insights into its functional capabilities within microbial communities. Its single replicon may reflect evolutionary adaptations that enhance its resilience or competitive edge in specific environments. Understanding the ecological roles of such bacteria can contribute to broader knowledge about microbial diversity and function in ecosystems, particularly in relation to nutrient cycling and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas sp. SGD-10
Strain1090

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas sp. SGD-10 1090, whole genome shotgun sequence.

Gene Summary

Adenine Count

1069322 bp

Thymine Count

1075077 bp

Guanine Count

1566581 bp

Cytosine Count

1582600 bp

Genome Length

5378430 bp

Protein-coding Genes

5141 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase family 1 proteinEIM50_11170Not AvailableNegative2413395 - 241453741292.7
exodeoxyribonuclease vii large subunitEIM50_11175Not AvailableNegative2414638 - 241599649896.5
trna epoxyqueuosine(34) reductase quegEIM50_11180Not AvailableNegative2416123 - 241721140467.1
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseEIM50_11185Not AvailablePositive2417272 - 241878351126.5
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeEIM50_11190Not AvailablePositive2418777 - 241925316619.8
n-acetylmuramoyl-l-alanine amidaseEIM50_11195Not AvailablePositive2419335 - 242088552209.3
dna mismatch repair endonuclease mutlEIM50_11200Not AvailablePositive2420970 - 242281466254.9
duf1684 domain-containing proteinEIM50_11205Not AvailablePositive2422811 - 242376434804.0
trab/gumn family proteinEIM50_11210Not AvailablePositive2423779 - 242471433716.1
rnf electron transport complex subunit rnfbEIM50_11215Not AvailableNegative2424730 - 242515514516.9

Displaying genes 2251 – 2260 of 5234 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.