Pseudoxanthomonas sp. SGD-10 1090

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas sp. SGD-10 1090 is characterized as a rod-shaped bacterium. It possesses a single replicon, which suggests a streamlined genomic organization potentially advantageous for its adaptability and survival in various environments. The genomic data for this organism is cataloged under the accession number RRYL00000000.1, providing a reference for researchers interested in its genetic characteristics and potential applications. The rod shape of Pseudoxanthomonas sp. SGD-10 1090 may influence its motility and interaction with its environment, allowing it to navigate through diverse substrates and possibly engage in various ecological roles. Rod-shaped bacteria are often associated with efficient nutrient uptake and can be found in numerous habitats, indicating a potential versatility in ecological niches. Investigating the traits of Pseudoxanthomonas sp. SGD-10 1090 could provide insights into its functional capabilities within microbial communities. Its single replicon may reflect evolutionary adaptations that enhance its resilience or competitive edge in specific environments. Understanding the ecological roles of such bacteria can contribute to broader knowledge about microbial diversity and function in ecosystems, particularly in relation to nutrient cycling and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas sp. SGD-10
Strain1090

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas sp. SGD-10 1090, whole genome shotgun sequence.

Gene Summary

Adenine Count

1069322 bp

Thymine Count

1075077 bp

Guanine Count

1566581 bp

Cytosine Count

1582600 bp

Genome Length

5378430 bp

Protein-coding Genes

5141 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylformylglycinamidine synthaseEIM50_07765Not AvailableNegative1714942 - 1718835139437.0
dsbc family proteinEIM50_07770Not AvailableNegative1718936 - 171973627991.7
site-specific tyrosine recombinase xerdEIM50_07775Not AvailableNegative1719963 - 172089834140.2
rdd family proteinEIM50_07780Not AvailablePositive1721029 - 172152918583.8
lps export abc transporter permease lptgEIM50_07785Not AvailableNegative1721533 - 172263340152.0
lps export abc transporter permease lptfEIM50_07790Not AvailableNegative1722630 - 172371239178.9
leucyl aminopeptidaseEIM50_07795Not AvailablePositive1723833 - 172532351665.8
dna polymerase iii subunit chiEIM50_07800Not AvailablePositive1725334 - 172575615808.9
valine--trna ligaseEIM50_07805Not AvailablePositive1725886 - 1728714105591.0
ribosomal-protein-alanine n-acetyltransferaseEIM50_07810Not AvailableNegative1728908 - 172936316912.5

Displaying genes 1581 – 1590 of 5234 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.