Pseudoxanthomonas sp. SGD-10 1090

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas sp. SGD-10 1090 is characterized as a rod-shaped bacterium. It possesses a single replicon, which suggests a streamlined genomic organization potentially advantageous for its adaptability and survival in various environments. The genomic data for this organism is cataloged under the accession number RRYL00000000.1, providing a reference for researchers interested in its genetic characteristics and potential applications. The rod shape of Pseudoxanthomonas sp. SGD-10 1090 may influence its motility and interaction with its environment, allowing it to navigate through diverse substrates and possibly engage in various ecological roles. Rod-shaped bacteria are often associated with efficient nutrient uptake and can be found in numerous habitats, indicating a potential versatility in ecological niches. Investigating the traits of Pseudoxanthomonas sp. SGD-10 1090 could provide insights into its functional capabilities within microbial communities. Its single replicon may reflect evolutionary adaptations that enhance its resilience or competitive edge in specific environments. Understanding the ecological roles of such bacteria can contribute to broader knowledge about microbial diversity and function in ecosystems, particularly in relation to nutrient cycling and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas sp. SGD-10
Strain1090

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas sp. SGD-10 1090, whole genome shotgun sequence.

Gene Summary

Adenine Count

1069322 bp

Thymine Count

1075077 bp

Guanine Count

1566581 bp

Cytosine Count

1582600 bp

Genome Length

5378430 bp

Protein-coding Genes

5141 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh oxidoreductase (quinone) subunit fEIM50_06250Not AvailableNegative1392176 - 139354650121.2
nadh-quinone oxidoreductase subunit nuoeEIM50_06255Not AvailableNegative1393558 - 139408519400.1
nadh-quinone oxidoreductase subunit dEIM50_06260Not AvailableNegative1394082 - 139539549826.9
nadh-quinone oxidoreductase subunit cEIM50_06265Not AvailableNegative1395404 - 139615627891.8
nadh-quinone oxidoreductase subunit bEIM50_06270Not AvailableNegative1396217 - 139679521169.9
nadh-quinone oxidoreductase subunit aEIM50_06275Not AvailableNegative1396786 - 139714213511.0
Trna-leuNot AvailableNot AvailablePositive1397437 - 1397521Not Available
preprotein translocase subunit secgEIM50_06285Not AvailableNegative1397568 - 139799914356.5
triose-phosphate isomeraseEIM50_06290Not AvailableNegative1398014 - 139877226562.8
isopenicillin n synthase family oxygenaseEIM50_06295Not AvailableNegative1398876 - 139981435017.3

Displaying genes 1281 – 1290 of 5234 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.