Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative minor tail protein | DU333_05465 | Not Available | Positive | 1132964 - 1133293 | 12530.1 |
| Putative minor tail protein | DU333_05470 | Not Available | Positive | 1133303 - 1134001 | 25637.9 |
| Tail fiber component | DU333_05475 | Not Available | Positive | 1134007 - 1134750 | 28191.3 |
| Putative tail component | DU333_05480 | Not Available | Positive | 1134648 - 1135295 | 22571.4 |
| Host specificity protein | DU333_05485 | Not Available | Positive | 1135356 - 1138754 | 124386.0 |
| Putative outer membrane protein lom precursor | DU333_05490 | Not Available | Positive | 1138821 - 1139420 | 21853.3 |
| Qin prophage | DU333_05495 | Not Available | Positive | 1139485 - 1142400 | 96129.9 |
| Qin prophage | DU333_05500 | Not Available | Positive | 1142400 - 1142975 | 21322.9 |
| Attr | Not Available | Not Available | Positive | 1142675 - 1142686 | Not Available |
| Recombinase family protein | DU333_05505 | Not Available | Negative | 1143073 - 1143663 | 21909.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




