Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transcriptional repressor dica | DU333_05265 | Not Available | Negative | 1105851 - 1106258 | 15336.2 |
| Regulatory protein cro (antirepressor) | DU333_05270 | Not Available | Positive | 1106336 - 1106563 | 8418.91 |
| Putative cii repressor | DU333_05275 | Not Available | Positive | 1106547 - 1107068 | 19909.8 |
| Replication protein | DU333_05280 | Not Available | Positive | 1107049 - 1108014 | 36962.0 |
| Lygf | DU333_05285 | Not Available | Positive | 1108055 - 1108456 | 15357.6 |
| duf4209 domain-containing protein | DU333_05290 | Not Available | Negative | 1108675 - 1110462 | 67354.2 |
| Hypothetical protein | DU333_05295 | Not Available | Negative | 1110914 - 1111035 | 4526.49 |
| Host cell-killing modulation protein | DU333_05300 | Not Available | Positive | 1111080 - 1111292 | 7887.85 |
| hypothetical protein | DU333_05305 | Not Available | Positive | 1111509 - 1111760 | 9291.32 |
| Hypothetical protein | DU333_05310 | Not Available | Positive | 1111827 - 1112105 | 11168.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




