Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | DU333_03210 | Not Available | Positive | 718985 - 719542 | 18712.6 |
| prepilin-type cleavage/methylation domain-containing protein | DU333_03215 | Not Available | Positive | 719595 - 721058 | 51362.7 |
| site-specific integrase | DU333_03225 | Not Available | Negative | 723107 - 724327 | 45884.7 |
| metal-binding protein zint | DU333_03230 | Not Available | Negative | 725175 - 725825 | 24786.2 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | DU333_03235 | Not Available | Negative | 726083 - 726718 | 23998.5 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | DU333_03240 | Not Available | Negative | 726719 - 727723 | 37447.0 |
| hydroxyisourate hydrolase | DU333_03245 | Not Available | Negative | 727832 - 728245 | 15509.5 |
| dna-binding response regulator hprr | DU333_03250 | Not Available | Positive | 728378 - 729049 | 24982.2 |
| hamp domain-containing protein | DU333_03255 | Not Available | Positive | 729049 - 730407 | 50750.7 |
| molecular chaperone hsp31 and glyoxalase 3 | DU333_03260 | Not Available | Negative | 730515 - 731366 | 31238.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




