Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 656720 - 656795 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 658543 - 658618 | Not Available |
| hth-type transcriptional regulator cbl | DU333_02965 | Not Available | Negative | 658656 - 659606 | 35858.1 |
| nitrogen assimilation transcriptional regulator | DU333_02970 | Not Available | Negative | 659708 - 660625 | 32795.0 |
| Trna-asn | Not Available | Not Available | Positive | 660952 - 661027 | Not Available |
| yebc/pmpr family dna-binding transcriptional regulator | DU333_02980 | Not Available | Negative | 661481 - 662197 | 25868.5 |
| amp nucleosidase | DU333_02985 | Not Available | Negative | 662540 - 663994 | 54040.0 |
| shikimate transporter | DU333_02990 | Not Available | Negative | 664096 - 665412 | 47768.1 |
| lipopolysaccharide heptosyltransferase family protein | DU333_02995 | Not Available | Positive | 665727 - 666779 | 39484.4 |
| invasin | DU333_03000 | Not Available | Negative | 666907 - 667383 | 16397.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




