Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf rna polymerase sigma-e factor | DU333_02790 | Not Available | Negative | 615785 - 616360 | 21697.0 |
| rpoe leader peptide rsed | DU333_02795 | Not Available | Negative | 616357 - 616512 | 6229.83 |
| l-aspartate oxidase | DU333_02800 | Not Available | Positive | 616768 - 618390 | 60153.6 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | DU333_02805 | Not Available | Negative | 618375 - 619112 | 27274.4 |
| atp-dependent rna helicase srmb | DU333_02810 | Not Available | Positive | 619244 - 620578 | 49901.0 |
| lysr family transcriptional regulator | DU333_02815 | Not Available | Negative | 620611 - 621492 | 33324.5 |
| cysteine/o-acetylserine efflux protein | DU333_02820 | Not Available | Positive | 621595 - 622182 | 21279.5 |
| autonomous glycyl radical cofactor grca | DU333_02825 | Not Available | Negative | 622238 - 622621 | 14269.0 |
| uracil-dna glycosylase | DU333_02830 | Not Available | Positive | 622926 - 623615 | 25682.6 |
| trna/rrna methyltransferase | DU333_02835 | Not Available | Negative | 623663 - 624700 | 37852.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




