Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holo-acp synthase | DU333_02740 | Not Available | Negative | 606971 - 607351 | 14153.2 |
| pyridoxine 5'-phosphate synthase | DU333_02745 | Not Available | Negative | 607351 - 608082 | 26376.9 |
| dna repair protein reco | DU333_02750 | Not Available | Negative | 608094 - 608822 | 27392.2 |
| gtpase era | DU333_02755 | Not Available | Negative | 608834 - 609739 | 33798.1 |
| ribonuclease 3 | DU333_02760 | Not Available | Negative | 609736 - 610416 | 25551.6 |
| s26 family signal peptidase | DU333_02765 | Not Available | Negative | 610683 - 611657 | 35948.3 |
| elongation factor 4 | DU333_02770 | Not Available | Negative | 611673 - 613472 | 66516.1 |
| soxr-reducing system protein rsec | DU333_02775 | Not Available | Negative | 613670 - 614149 | 16674.3 |
| sigma-e factor regulatory protein rseb | DU333_02780 | Not Available | Negative | 614146 - 615102 | 35737.7 |
| anti-sigma-e factor rsea | DU333_02785 | Not Available | Negative | 615102 - 615752 | 24350.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




