Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | DU333_02640 | Not Available | Negative | 580283 - 581155 | 32732.4 |
| alcohol dehydrogenase | DU333_02645 | Not Available | Negative | 581167 - 582228 | 38053.0 |
| abc transporter permease | DU333_02650 | Not Available | Negative | 582294 - 583292 | 34502.7 |
| sugar abc transporter atp-binding protein | DU333_02655 | Not Available | Negative | 583317 - 584828 | 54986.8 |
| sugar abc transporter substrate-binding protein | DU333_02660 | Not Available | Negative | 584851 - 585834 | 35161.3 |
| duf5107 domain-containing protein | DU333_02665 | Not Available | Negative | 585931 - 589212 | 123773.0 |
| rok family protein | DU333_02670 | Not Available | Positive | 589330 - 590523 | 44504.3 |
| serine hydroxymethyltransferase | DU333_02675 | Not Available | Negative | 590587 - 591840 | 45319.2 |
| no-inducible flavohemoprotein | DU333_02680 | Not Available | Positive | 592169 - 593359 | 43867.1 |
| nitrogen regulatory protein p-ii 1 | DU333_02685 | Not Available | Negative | 593404 - 593742 | 12426.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




