Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster assembly protein isca | DU333_02590 | Not Available | Negative | 571231 - 571554 | 11556.7 |
| iron-sulfur cluster scaffold-like protein | DU333_02595 | Not Available | Negative | 571571 - 571957 | 13849.3 |
| iscs subfamily cysteine desulfurase | DU333_02600 | Not Available | Negative | 571985 - 573199 | 45092.2 |
| fe-s cluster assembly transcriptional regulator iscr | DU333_02605 | Not Available | Negative | 573311 - 573799 | 17337.6 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | DU333_02610 | Not Available | Negative | 574069 - 574809 | 27049.6 |
| inositol-1-monophosphatase | DU333_02615 | Not Available | Positive | 574928 - 575731 | 29173.8 |
| alpha/beta hydrolase | DU333_02620 | Not Available | Positive | 575876 - 576730 | 31517.7 |
| stationary phase inducible protein csie | DU333_02625 | Not Available | Positive | 576921 - 578201 | 49064.4 |
| 3-phenylpropionate mfs transporter | DU333_02630 | Not Available | Negative | 578193 - 579332 | 41581.1 |
| doxx family protein | DU333_02635 | Not Available | Positive | 579701 - 580123 | 15170.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




