Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | DU333_02540 | Not Available | Negative | 556545 - 556976 | 15437.3 |
| penicillin-binding protein 1c | DU333_02545 | Not Available | Negative | 557125 - 559437 | 85094.0 |
| alpha-2-macroglobulin family protein | DU333_02550 | Not Available | Negative | 559438 - 564399 | 181414.0 |
| 3-mercaptopyruvate sulfurtransferase | DU333_02555 | Not Available | Positive | 564606 - 565451 | 30847.5 |
| protein sseb | DU333_02560 | Not Available | Negative | 565944 - 566720 | 28600.0 |
| aminopeptidase pepb | DU333_02565 | Not Available | Negative | 566862 - 568145 | 46233.7 |
| fe-s assembly protein iscx | DU333_02570 | Not Available | Negative | 568204 - 568404 | 7731.92 |
| isc system 2fe-2s type ferredoxin | DU333_02575 | Not Available | Negative | 568416 - 568751 | 12359.5 |
| molecular chaperone hsca | DU333_02580 | Not Available | Negative | 568753 - 570603 | 65656.3 |
| co-chaperone protein hscb | DU333_02585 | Not Available | Negative | 570620 - 571135 | 20138.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




