Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional repressor | DU333_02390 | Not Available | Positive | 514109 - 514681 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | DU333_02395 | Not Available | Positive | 514681 - 515151 | 17634.9 |
| ai-2e family transporter | DU333_02400 | Not Available | Negative | 515250 - 516311 | 39151.8 |
| beta-barrel assembly-enhancing protease | DU333_02405 | Not Available | Positive | 516524 - 517987 | 53907.1 |
| arsenate reductase (glutaredoxin) | DU333_02410 | Not Available | Positive | 518008 - 518367 | 13459.5 |
| dnaa inactivator hda | DU333_02415 | Not Available | Negative | 518505 - 519251 | 28371.4 |
| uracil/xanthine transporter | DU333_02420 | Not Available | Negative | 519301 - 520590 | 45095.1 |
| uracil phosphoribosyltransferase | DU333_02425 | Not Available | Negative | 520676 - 521302 | 22534.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | DU333_02430 | Not Available | Positive | 521626 - 522663 | 36904.3 |
| phosphoribosylglycinamide formyltransferase | DU333_02435 | Not Available | Positive | 522663 - 523301 | 23283.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




