Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | DU333_01785 | Not Available | Negative | 387830 - 388357 | 18771.4 |
| fimbrial protein | DU333_01790 | Not Available | Negative | 388354 - 388833 | 17275.2 |
| hypothetical protein | DU333_01795 | Not Available | Negative | 388830 - 389333 | 17566.1 |
| fimbrial protein stfd | DU333_01800 | Not Available | Negative | 389350 - 390102 | 27942.0 |
| fimbrial biogenesis outer membrane usher protein | DU333_01805 | Not Available | Negative | 390122 - 392770 | 97179.1 |
| phosphohistidine phosphatase sixa | DU333_01815 | Not Available | Negative | 393960 - 394445 | 17219.8 |
| fatty acid oxidation complex subunit alpha fadj | DU333_01820 | Not Available | Negative | 394648 - 396792 | 77153.0 |
| acetyl-coa c-acyltransferase fadi | DU333_01825 | Not Available | Negative | 396792 - 398102 | 46559.4 |
| duf406 family protein | DU333_01830 | Not Available | Negative | 398283 - 398567 | 10318.2 |
| long-chain fatty acid transporter fadl | DU333_01835 | Not Available | Positive | 398939 - 400279 | 48549.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




