Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfbu family protein | DU333_01585 | Not Available | Negative | 349337 - 349831 | 19537.4 |
| duf412 domain-containing protein | DU333_01590 | Not Available | Negative | 349914 - 350369 | 17147.1 |
| acetate kinase | DU333_01595 | Not Available | Positive | 350707 - 351909 | 43293.0 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 351920 - 352027 | Not Available |
| phosphate acetyltransferase | DU333_01600 | Not Available | Positive | 351984 - 354128 | 77217.6 |
| putative basic amino acid antiporter yfcc | DU333_01605 | Not Available | Positive | 354318 - 355838 | 54814.1 |
| nudix hydrolase yfcd | DU333_01610 | Not Available | Negative | 355871 - 356413 | 20376.9 |
| phosphodiesterase | DU333_01615 | Not Available | Negative | 356471 - 357022 | 20020.1 |
| glutathione transferase | DU333_01620 | Not Available | Negative | 357078 - 357722 | 24298.9 |
| gsh-dependent disulfide bond oxidoreductase | DU333_01625 | Not Available | Positive | 357858 - 358505 | 24482.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




