Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit c/d | DU333_01545 | Not Available | Negative | 339293 - 341095 | 68714.5 |
| nadh-quinone oxidoreductase subunit b | DU333_01550 | Not Available | Negative | 341189 - 341851 | 25057.3 |
| nadh-quinone oxidoreductase subunit nuoa | DU333_01555 | Not Available | Negative | 341867 - 342310 | 16458.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 343009 - 343124 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 343254 - 343369 | Not Available |
| transcriptional regulator | DU333_01560 | Not Available | Negative | 342940 - 343878 | 34611.8 |
| glutamate--pyruvate aminotransferase alaa | DU333_01565 | Not Available | Positive | 344798 - 346015 | 45519.9 |
| 5'-deoxynucleotidase | DU333_01570 | Not Available | Positive | 346099 - 346698 | 22667.2 |
| transporter | DU333_01575 | Not Available | Negative | 346757 - 348589 | 65876.0 |
| sugar phosphatase | DU333_01580 | Not Available | Negative | 348676 - 349326 | 23051.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




