Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferase | DU333_01395 | Not Available | Positive | 307044 - 308183 | 41623.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | DU333_01400 | Not Available | Positive | 308187 - 309155 | 36254.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | DU333_01405 | Not Available | Positive | 309155 - 311137 | 74322.2 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase arnd | DU333_01410 | Not Available | Positive | 311134 - 312024 | 33005.4 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | DU333_01415 | Not Available | Positive | 312024 - 313676 | 62568.0 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | DU333_01420 | Not Available | Positive | 313673 - 314008 | 12166.6 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | DU333_01425 | Not Available | Positive | 314008 - 314394 | 14076.0 |
| signal transduction protein pmrd | DU333_01430 | Not Available | Negative | 314388 - 314654 | 9859.03 |
| o-succinylbenzoate--coa ligase | DU333_01435 | Not Available | Negative | 314764 - 316119 | 50182.5 |
| o-succinylbenzoate synthase | DU333_01440 | Not Available | Negative | 316116 - 317078 | 35452.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




