Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isncy family transposase | DU333_01345 | Not Available | Positive | 297960 - 298919 | 37100.5 |
| hypothetical protein | DU333_01350 | Not Available | Positive | 298932 - 299117 | 6865.19 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | DU333_01355 | Not Available | Negative | 299158 - 299961 | 28912.7 |
| mfs transporter | DU333_01360 | Not Available | Negative | 299979 - 301268 | 46181.3 |
| l-rhamnonate dehydratase | DU333_01365 | Not Available | Negative | 301325 - 302530 | 44190.9 |
| iclr family transcriptional regulator | DU333_01370 | Not Available | Negative | 302545 - 303327 | 29092.2 |
| nicotinamide mononucleotide deamidase-related protein yfay | DU333_01375 | Not Available | Negative | 303547 - 304749 | 44192.1 |
| hypothetical protein | DU333_01380 | Not Available | Negative | 304849 - 305391 | 18518.6 |
| nucleoside triphosphatase nudi | DU333_01385 | Not Available | Positive | 305670 - 306095 | 16371.6 |
| histidine phosphatase family protein | DU333_01390 | Not Available | Negative | 306134 - 306736 | 22394.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




