Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate coa-transferase subunit alpha | DU333_01240 | Not Available | Positive | 264846 - 265508 | 23522.7 |
| succinyl-coa--3-ketoacid-coa transferase | DU333_01245 | Not Available | Positive | 265508 - 266158 | 22975.1 |
| short-chain fatty acids transporter | DU333_01250 | Not Available | Positive | 266155 - 267477 | 47548.7 |
| acetyl-coa c-acetyltransferase | DU333_01255 | Not Available | Positive | 267508 - 268692 | 40368.0 |
| duf2135 domain-containing protein | DU333_01260 | Not Available | Negative | 268766 - 269542 | 28245.2 |
| duf2300 domain-containing protein | DU333_01265 | Not Available | Negative | 269547 - 271196 | 61615.4 |
| alpha-2-macroglobulin family protein | DU333_01270 | Not Available | Negative | 271197 - 275591 | 162430.0 |
| duf2138 domain-containing protein | DU333_01280 | Not Available | Negative | 276355 - 278043 | 62617.6 |
| dna topoisomerase (atp-hydrolyzing) subunit a | DU333_01285 | Not Available | Negative | 278192 - 280819 | 97015.4 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | DU333_01290 | Not Available | Positive | 280966 - 281688 | 26561.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




