Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin j25 efflux abc transporter yoji | DU333_01190 | Not Available | Negative | 248383 - 250026 | 61610.5 |
| dna oxidative demethylase alkb | DU333_01195 | Not Available | Negative | 250102 - 250752 | 24034.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | DU333_01200 | Not Available | Negative | 250752 - 251816 | 39289.0 |
| fad:protein fmn transferase apbe | DU333_01205 | Not Available | Negative | 251890 - 252945 | 38522.0 |
| porin ompc | DU333_01210 | Not Available | Negative | 253057 - 254148 | 39997.9 |
| phosphotransferase rcsd | DU333_01215 | Not Available | Positive | 254887 - 257559 | 100370.0 |
| dna-binding response regulator | DU333_01220 | Not Available | Positive | 257576 - 258226 | 23672.0 |
| two-component system sensor histidine kinase rcsc | DU333_01225 | Not Available | Negative | 258426 - 261275 | 106542.0 |
| two-component system sensor histidine kinase atos | DU333_01230 | Not Available | Positive | 261442 - 263268 | 67844.2 |
| acetoacetate metabolism regulator atoc | DU333_01235 | Not Available | Positive | 263265 - 264650 | 52151.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




