Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 231357 - 231433 | Not Available |
| autotransporter outer membrane beta-barrel domain-containing protein | DU333_01095 | Not Available | Negative | 231535 - 232020 | 17012.7 |
| nitrate/nitrite response regulator protein narp | DU333_01100 | Not Available | Positive | 232652 - 233299 | 23626.5 |
| cytochrome c-type biogenesis protein ccmh | DU333_01105 | Not Available | Negative | 233334 - 234386 | 39107.3 |
| thiol:disulfide interchange protein dsbe | DU333_01110 | Not Available | Negative | 234383 - 234940 | 20810.1 |
| heme lyase ccmf/nrfe family subunit | DU333_01115 | Not Available | Negative | 234937 - 236880 | 71392.5 |
| cytochrome c-type biogenesis protein ccme | DU333_01120 | Not Available | Negative | 236877 - 237356 | 17699.4 |
| heme exporter protein d | DU333_01125 | Not Available | Negative | 237353 - 237562 | 7745.59 |
| heme exporter protein c | DU333_01130 | Not Available | Negative | 237559 - 238296 | 27886.9 |
| heme exporter protein ccmb | DU333_01135 | Not Available | Negative | 238338 - 239000 | 23592.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




