Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p-like protein yeip | DU333_01000 | Not Available | Positive | 210594 - 211166 | 21533.9 |
| mannitol dehydrogenase family protein | DU333_01005 | Not Available | Positive | 211389 - 212855 | 54043.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 212339 - 212435 | Not Available |
| gtp-binding protein | DU333_01010 | Not Available | Positive | 212973 - 213959 | 36058.2 |
| lipid a 1-diphosphate synthase | DU333_01015 | Not Available | Positive | 213998 - 214711 | 26760.7 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | DU333_01020 | Not Available | Positive | 215123 - 215689 | 21041.1 |
| cyclic di-gmp phosphodiesterase | DU333_01025 | Not Available | Positive | 215870 - 217426 | 58562.5 |
| abc transporter substrate-binding protein | DU333_01030 | Not Available | Positive | 217508 - 219322 | 69751.7 |
| abc transporter permease | DU333_01035 | Not Available | Positive | 219323 - 220417 | 40362.6 |
| abc transporter permease | DU333_01040 | Not Available | Positive | 220417 - 221442 | 38108.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




