Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | DU333_00850 | Not Available | Positive | 178150 - 179034 | 31568.6 |
| protein sana | DU333_00855 | Not Available | Positive | 179184 - 179903 | 27288.5 |
| duf2542 family protein | DU333_00860 | Not Available | Positive | 179906 - 180145 | 9264.61 |
| nad(p)-dependent oxidoreductase | DU333_00865 | Not Available | Positive | 180339 - 181577 | 44181.9 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | DU333_00870 | Not Available | Positive | 181571 - 182806 | 45061.4 |
| galactose/methyl galactoside abc transporter permease mglc | DU333_00875 | Not Available | Negative | 183049 - 184059 | 35580.4 |
| galactose/methyl galactoside import atp-binding protein mgla | DU333_00880 | Not Available | Negative | 184075 - 185595 | 56391.8 |
| galactose abc transporter substrate-binding protein | DU333_00885 | Not Available | Negative | 185656 - 186654 | 35714.5 |
| hth-type transcriptional regulator gals | DU333_00890 | Not Available | Negative | 186934 - 187974 | 37447.1 |
| duf418 family protein | DU333_00895 | Not Available | Negative | 188116 - 189273 | 43437.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




