Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase | DU333_00800 | Not Available | Positive | 168481 - 170196 | 64707.1 |
| d-alanyl-d-alanine endopeptidase | DU333_00805 | Not Available | Negative | 170235 - 171167 | 33917.4 |
| yip1 family protein | DU333_00810 | Not Available | Negative | 171341 - 171928 | 21692.0 |
| deda family protein | DU333_00815 | Not Available | Positive | 172098 - 172676 | 21461.9 |
| sdr family oxidoreductase | DU333_00820 | Not Available | Negative | 172796 - 173557 | 27023.6 |
| multidrug resistance outer membrane protein mdtq | DU333_00825 | Not Available | Negative | 173610 - 175136 | 55717.5 |
| protein yohp | DU333_00830 | Not Available | Positive | 175270 - 175353 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | DU333_00835 | Not Available | Negative | 175741 - 176691 | 35357.7 |
| hypothetical protein | DU333_00840 | Not Available | Positive | 176930 - 177328 | 14579.6 |
| cidb/lrgb family autolysis modulator | DU333_00845 | Not Available | Positive | 177325 - 178020 | 24471.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




