Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU333_25310 | Not Available | Negative | 5069345 - 5070130 | 29469.2 |
| Trna-asp | Not Available | Not Available | Positive | 5070459 - 5070535 | Not Available |
| dna polymerase iii subunit epsilon | DU333_25320 | Not Available | Negative | 5070668 - 5071399 | 27130.5 |
| ribonuclease hi | DU333_25325 | Not Available | Positive | 5071464 - 5071931 | 17597.9 |
| sam-dependent methyltransferase | DU333_25330 | Not Available | Negative | 5071928 - 5072650 | 27212.7 |
| hydroxyacylglutathione hydrolase | DU333_25335 | Not Available | Positive | 5072684 - 5073439 | 28478.0 |
| murein transglycosylase d | DU333_25340 | Not Available | Positive | 5073511 - 5074869 | 49420.3 |
| sam-dependent methyltransferase | DU333_25345 | Not Available | Negative | 5074916 - 5075686 | 28335.5 |
| endonuclease/exonuclease/phosphatase family protein | DU333_25350 | Not Available | Negative | 5075764 - 5076564 | 29993.4 |
| lysr family transcriptional regulator | DU333_25355 | Not Available | Positive | 5076805 - 5077719 | 33679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




