Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin ccdb | DU333_24315 | Not Available | Negative | 4852024 - 4852329 | 11693.2 |
| antitoxin ccda | DU333_24320 | Not Available | Negative | 4852331 - 4852549 | 8372.8 |
| hypothetical protein | DU333_24325 | Not Available | Positive | 4853187 - 4853414 | 8191.65 |
| hypothetical protein | DU333_24330 | Not Available | Positive | 4854871 - 4855512 | 23788.2 |
| hypothetical protein | DU333_24335 | Not Available | Positive | 4855569 - 4855775 | 8210.83 |
| hypothetical protein | DU333_24340 | Not Available | Positive | 4855889 - 4856377 | 18477.1 |
| repb family plasmid replication initiator protein | DU333_24345 | Not Available | Positive | 4856687 - 4857664 | 37331.1 |
| site-specific integrase | DU333_24350 | Not Available | Negative | 4857907 - 4858647 | 28163.5 |
| serine/threonine protein kinase | DU333_24355 | Not Available | Negative | 4858768 - 4858956 | 7108.39 |
| hypothetical protein | DU333_24360 | Not Available | Positive | 4859323 - 4860492 | 44727.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




