Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU333_24255 | Not Available | Negative | 4844336 - 4844605 | 9600.85 |
| isl3-like element isec53 family transposase | DU333_24260 | Not Available | Negative | 4844717 - 4845937 | 47054.0 |
| clbs/dfsb family four-helix bundle protein | DU333_24265 | Not Available | Negative | 4845956 - 4846474 | 19590.5 |
| dini family protein | DU333_24275 | Not Available | Positive | 4846609 - 4846857 | 9459.24 |
| peptidase | DU333_24280 | Not Available | Positive | 4846854 - 4847291 | 16264.2 |
| plasmid stability protein | DU333_24290 | Not Available | Negative | 4848566 - 4848958 | 14680.6 |
| plasmid segregation protein parm | DU333_24295 | Not Available | Negative | 4848963 - 4849934 | 35656.5 |
| chromosome partitioning protein para | DU333_24300 | Not Available | Positive | 4850163 - 4850807 | 23518.2 |
| copg family transcriptional regulator | DU333_24305 | Not Available | Positive | 4850801 - 4851076 | 10060.2 |
| phage integrase family protein | DU333_24310 | Not Available | Negative | 4851214 - 4852023 | 29853.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




