Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trap | DU333_24040 | Not Available | Negative | 4819671 - 4820261 | 22020.7 |
| conjugal transfer protein trab | DU333_24045 | Not Available | Negative | 4820251 - 4821678 | 50486.9 |
| type-f conjugative transfer system secretin trak | DU333_24050 | Not Available | Negative | 4821678 - 4822349 | 23511.0 |
| type iv conjugative transfer system protein trae | DU333_24055 | Not Available | Negative | 4822393 - 4822959 | 21239.6 |
| type iv conjugative transfer system protein tral | DU333_24060 | Not Available | Negative | 4822981 - 4823292 | 11916.7 |
| type iv conjugative transfer system pilin traa | DU333_24065 | Not Available | Negative | 4823307 - 4823666 | 12770.4 |
| relaxosome protein tray | DU333_24070 | Not Available | Negative | 4823700 - 4823927 | 9072.72 |
| protein traj | DU333_24075 | Not Available | Negative | 4824021 - 4824707 | 26434.7 |
| relaxosome protein tram | DU333_24080 | Not Available | Negative | 4824901 - 4825284 | 14421.1 |
| lytic transglycosylase | DU333_24085 | Not Available | Positive | 4825615 - 4826217 | 22909.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




