Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbj | DU333_23935 | Not Available | Negative | 4806795 - 4807142 | 12944.0 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | DU333_23940 | Not Available | Negative | 4807072 - 4807617 | 20031.3 |
| type-f conjugative transfer system pilin chaperone traq | DU333_23945 | Not Available | Negative | 4807604 - 4807888 | 10823.3 |
| toxin arta | DU333_23950 | Not Available | Positive | 4807969 - 4808304 | 12868.5 |
| conjugal transfer protein trba | DU333_23955 | Not Available | Negative | 4808285 - 4808626 | 12535.9 |
| type-f conjugative transfer system pilin assembly protein traf | DU333_23960 | Not Available | Negative | 4808640 - 4809383 | 28066.7 |
| conjugal transfer protein trbe | DU333_23965 | Not Available | Negative | 4809376 - 4809633 | 9761.9 |
| type-f conjugative transfer system mating-pair stabilization protein tran | DU333_23970 | Not Available | Negative | 4809660 - 4811510 | 66727.2 |
| type-f conjugative transfer system pilin assembly protein trbc | DU333_23975 | Not Available | Negative | 4811507 - 4812145 | 23524.1 |
| hypothetical protein | DU333_23980 | Not Available | Negative | 4812154 - 4812459 | 11828.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




