Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DU333_23885 | Not Available | Negative | 4790872 - 4791732 | 31675.9 |
| protein trax | DU333_23890 | Not Available | Negative | 4791791 - 4792537 | 27308.6 |
| conjugative transfer relaxase/helicase trai | DU333_23895 | Not Available | Negative | 4792557 - 4797827 | 191775.0 |
| type iv conjugative transfer system coupling protein trad | DU333_23900 | Not Available | Negative | 4797827 - 4799971 | 81092.0 |
| hypothetical protein | DU333_23905 | Not Available | Negative | 4800022 - 4800759 | 27532.8 |
| complement resistance protein trat | DU333_23910 | Not Available | Negative | 4800962 - 4801693 | 25932.2 |
| surface exclusion protein | DU333_23915 | Not Available | Negative | 4801742 - 4802221 | 18294.2 |
| conjugal transfer protein trag | DU333_23920 | Not Available | Negative | 4802243 - 4805065 | 102647.0 |
| conjugal transfer protein trah | DU333_23925 | Not Available | Negative | 4805062 - 4806435 | 50236.3 |
| conjugal transfer protein trbf | DU333_23930 | Not Available | Negative | 4806422 - 4806847 | 17152.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




