Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DU333_23340 | Not Available | Positive | 4694234 - 4695154 | 33551.2 |
| hypothetical protein | DU333_23345 | Not Available | Positive | 4695154 - 4695228 | 2735.34 |
| sdr family oxidoreductase | DU333_23350 | Not Available | Positive | 4695225 - 4695863 | 23325.2 |
| murein tripeptide amidase mpaa | DU333_23355 | Not Available | Positive | 4696154 - 4696882 | 26554.3 |
| l-ala-d/l-glu epimerase | DU333_23360 | Not Available | Negative | 4696857 - 4697822 | 34719.1 |
| 2-cys peroxiredoxin | DU333_23365 | Not Available | Positive | 4697941 - 4698447 | 17836.3 |
| transcriptional regulator tyrr | DU333_23370 | Not Available | Negative | 4698491 - 4700032 | 57641.4 |
| tigr01620 family protein | DU333_23375 | Not Available | Negative | 4700180 - 4701241 | 39394.5 |
| ycjx family protein | DU333_23380 | Not Available | Negative | 4701238 - 4702635 | 52631.5 |
| laci family transcriptional regulator | DU333_23385 | Not Available | Positive | 4702791 - 4703789 | 36194.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




