Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dha2 family efflux mfs transporter permease subunit | DU333_23285 | Not Available | Negative | 4683067 - 4684578 | 55554.7 |
| hlyd family secretion protein | DU333_23290 | Not Available | Negative | 4684578 - 4685606 | 37719.2 |
| arac family transcriptional regulator | DU333_23295 | Not Available | Positive | 4685703 - 4686518 | 30556.3 |
| methylated-dna--protein-cysteine methyltransferase | DU333_23305 | Not Available | Positive | 4687050 - 4687565 | 19180.2 |
| fumarate/nitrate reduction transcriptional regulator fnr | DU333_23310 | Not Available | Positive | 4687760 - 4688512 | 27968.9 |
| universal stress protein e | DU333_23315 | Not Available | Positive | 4688664 - 4689614 | 35708.9 |
| duf2534 family protein | DU333_23320 | Not Available | Negative | 4689664 - 4689921 | 9339.82 |
| mechanosensitive ion channel family protein | DU333_23325 | Not Available | Positive | 4690165 - 4691196 | 38799.9 |
| peptide abc transporter substrate-binding protein | DU333_23330 | Not Available | Negative | 4691247 - 4692860 | 59903.3 |
| lysr family transcriptional regulator | DU333_23335 | Not Available | Negative | 4693197 - 4694096 | 33395.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




