Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen assembly polymerase | DU333_23020 | Not Available | Negative | 4629685 - 4631037 | 51496.1 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | DU333_23025 | Not Available | Negative | 4631034 - 4632113 | 40501.7 |
| lipid iii flippase wzxe | DU333_23030 | Not Available | Negative | 4632110 - 4633360 | 45050.5 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | DU333_23035 | Not Available | Negative | 4633362 - 4634492 | 41965.5 |
| dtdp-fucosamine acetyltransferase | DU333_23040 | Not Available | Negative | 4634497 - 4635171 | 24219.7 |
| glucose-1-phosphate thymidylyltransferase 2 | DU333_23045 | Not Available | Negative | 4635149 - 4636030 | 32736.3 |
| dtdp-glucose 4,6-dehydratase | DU333_23050 | Not Available | Negative | 4636049 - 4637116 | 39750.9 |
| udp-n-acetyl-d-mannosamine dehydrogenase | DU333_23055 | Not Available | Negative | 4637116 - 4638378 | 45855.4 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | DU333_23060 | Not Available | Negative | 4638375 - 4639505 | 42211.0 |
| eca polysaccharide chain length modulation protein | DU333_23065 | Not Available | Negative | 4639561 - 4640607 | 39462.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




