Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU333_00550 | Not Available | Negative | 108127 - 108732 | 22718.2 |
| duf4034 domain-containing protein | DU333_00555 | Not Available | Negative | 108793 - 110901 | 82432.7 |
| duf1266 domain-containing protein | DU333_00560 | Not Available | Negative | 110912 - 111628 | 27584.2 |
| cytoplasmic protein | DU333_00565 | Not Available | Negative | 111628 - 112842 | 47117.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 113165 - 113280 | Not Available |
| u32 family peptidase | DU333_00570 | Not Available | Positive | 113330 - 114691 | 51196.1 |
| hypothetical protein | DU333_00575 | Not Available | Negative | 115191 - 115508 | 11407.8 |
| lipid kinase yegs | DU333_00580 | Not Available | Positive | 115924 - 116823 | 32019.6 |
| Ncrna_class:other | Not Available | Not Available | Positive | 117637 - 117820 | Not Available |
| deor/glpr transcriptional regulator | DU333_00585 | Not Available | Negative | 116905 - 117684 | 27946.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




