Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin | DU333_22815 | Not Available | Positive | 4589054 - 4589482 | 16297.0 |
| marr family transcriptional regulator | DU333_22820 | Not Available | Positive | 4589479 - 4589736 | 9675.79 |
| marr family transcriptional regulator | DU333_22825 | Not Available | Positive | 4589811 - 4590056 | 9363.3 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | DU333_22830 | Not Available | Negative | 4590225 - 4592486 | 84711.1 |
| transcriptional regulator | DU333_22835 | Not Available | Positive | 4592604 - 4593557 | 35645.1 |
| dmt family transporter | DU333_22840 | Not Available | Negative | 4593445 - 4594344 | 33756.0 |
| cof-type had-iib family hydrolase | DU333_22845 | Not Available | Negative | 4594420 - 4595220 | 29723.5 |
| lysophospholipase l2 | DU333_22850 | Not Available | Negative | 4595228 - 4596250 | 38966.4 |
| homoserine/homoserine lactone efflux protein | DU333_22855 | Not Available | Positive | 4596361 - 4596981 | 22428.2 |
| threonine export protein rhtc | DU333_22860 | Not Available | Negative | 4597042 - 4597662 | 22561.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




