Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygalactonokinase | DU333_22715 | Not Available | Positive | 4567663 - 4568667 | 36440.6 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DU333_22720 | Not Available | Positive | 4568657 - 4569286 | 22281.3 |
| tripartite tricarboxylate transporter substrate binding protein | DU333_22725 | Not Available | Positive | 4569311 - 4570285 | 34224.5 |
| tripartite tricarboxylate transporter tctb family protein | DU333_22730 | Not Available | Positive | 4570302 - 4570808 | 18051.8 |
| c4-dicarboxylate abc transporter permease | DU333_22735 | Not Available | Positive | 4570821 - 4572311 | 51823.3 |
| uridine phosphorylase | DU333_22740 | Not Available | Negative | 4572346 - 4573110 | 27288.8 |
| dienelactone hydrolase family protein | DU333_22745 | Not Available | Positive | 4573372 - 4574181 | 29284.6 |
| cysteine hydrolase | DU333_22750 | Not Available | Positive | 4574438 - 4575106 | 24036.1 |
| duf2877 domain-containing protein | DU333_22755 | Not Available | Positive | 4575112 - 4575972 | 32068.6 |
| acyl-coa synthetase fdra | DU333_22760 | Not Available | Positive | 4576067 - 4577626 | 54861.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




