Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | DU333_00500 | Not Available | Negative | 94968 - 95627 | 24159.8 |
| type i toxin-antitoxin system ibs family toxin | DU333_00505 | Not Available | Negative | 95845 - 95901 | 2102.89 |
| type i toxin-antitoxin system ibs family toxin | DU333_00510 | Not Available | Negative | 96173 - 96229 | 2079.86 |
| multidrug efflux rnd transporter subunit mdta | DU333_00515 | Not Available | Positive | 96508 - 97755 | 44486.8 |
| multidrug efflux rnd transporter permease subunit mdtb | DU333_00520 | Not Available | Positive | 97755 - 100877 | 112102.0 |
| multidrug efflux rnd transporter permease subunit mdtc | DU333_00525 | Not Available | Positive | 100878 - 103955 | 111006.0 |
| mfs transporter | DU333_00530 | Not Available | Positive | 103956 - 105371 | 50891.1 |
| two-component system sensor histidine kinase baes | DU333_00535 | Not Available | Positive | 105368 - 106771 | 52101.5 |
| dna-binding response regulator | DU333_00540 | Not Available | Positive | 106768 - 107490 | 27657.5 |
| duf1508 domain-containing protein | DU333_00545 | Not Available | Positive | 107670 - 108002 | 12022.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




