Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphatase | DU333_22160 | Not Available | Positive | 4447607 - 4448206 | 22761.0 |
| virulence factor brkb family protein | DU333_22165 | Not Available | Positive | 4448200 - 4449072 | 32840.7 |
| d-tyrosyl-trna(tyr) deacylase | DU333_22170 | Not Available | Positive | 4449069 - 4449506 | 15951.0 |
| gnat family n-acetyltransferase | DU333_22175 | Not Available | Positive | 4449503 - 4450492 | 37096.5 |
| alpha/beta hydrolase | DU333_22180 | Not Available | Negative | 4450556 - 4451464 | 33622.2 |
| type ii toxin-antitoxin system rele/pare family toxin | DU333_22185 | Not Available | Positive | 4451693 - 4452004 | 12203.9 |
| helix-turn-helix domain-containing protein | DU333_22190 | Not Available | Positive | 4452005 - 4452295 | 10847.1 |
| hypothetical protein | DU333_22195 | Not Available | Positive | 4452380 - 4452592 | 8267.17 |
| hypothetical protein | DU333_22200 | Not Available | Positive | 4452654 - 4452932 | 11130.1 |
| hypothetical protein | DU333_22205 | Not Available | Positive | 4452971 - 4453153 | 7079.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




