Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 family protein | DU333_22060 | Not Available | Positive | 4422973 - 4424403 | 52644.0 |
| acyltransferase | DU333_22065 | Not Available | Negative | 4424444 - 4425376 | 36276.1 |
| hypothetical protein | DU333_22070 | Not Available | Negative | 4425496 - 4425738 | 9277.36 |
| dna polymerase i | DU333_22075 | Not Available | Positive | 4425740 - 4428526 | 103278.0 |
| yiha family ribosome biogenesis gtp-binding protein | DU333_22080 | Not Available | Negative | 4428908 - 4429540 | 23562.2 |
| der gtpase-activating protein yihi | DU333_22085 | Not Available | Positive | 4430122 - 4430631 | 19058.3 |
| oxygen-independent coproporphyrinogen iii oxidase | DU333_22090 | Not Available | Positive | 4430820 - 4432193 | 52707.9 |
| hypothetical protein | DU333_22095 | Not Available | Negative | 4432331 - 4432441 | 3618.45 |
| nitrogen regulation protein nr(i) | DU333_22100 | Not Available | Negative | 4432553 - 4433962 | 52305.9 |
| two-component system sensor histidine kinase ntrb | DU333_22105 | Not Available | Negative | 4433974 - 4435023 | 38571.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




