Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpa | DU333_22005 | Not Available | Positive | 4411762 - 4413435 | 59055.5 |
| k(+)-transporting atpase subunit b | DU333_22010 | Not Available | Positive | 4413458 - 4415506 | 72328.6 |
| k(+)-transporting atpase subunit c | DU333_22015 | Not Available | Positive | 4415515 - 4416087 | 20409.4 |
| two-component system sensor histidine kinase kdbd | DU333_22020 | Not Available | Positive | 4416080 - 4418764 | 98621.1 |
| two-component system response regulator kdpe | DU333_22025 | Not Available | Positive | 4418761 - 4419438 | 25377.7 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | DU333_22035 | Not Available | Negative | 4419680 - 4420207 | 19374.5 |
| molybdenum cofactor guanylyltransferase | DU333_22040 | Not Available | Negative | 4420189 - 4420773 | 21788.4 |
| duf1040 family protein | DU333_22045 | Not Available | Positive | 4420843 - 4421112 | 10273.5 |
| serine/threonine protein kinase | DU333_22050 | Not Available | Positive | 4421189 - 4422175 | 38150.5 |
| thiol:disulfide interchange protein dsba | DU333_22055 | Not Available | Positive | 4422192 - 4422818 | 23119.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




