Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease viii | DU333_21955 | Not Available | Negative | 4403436 - 4404227 | 29800.7 |
| 5-oxoprolinase subunit pxpa | DU333_21960 | Not Available | Negative | 4404263 - 4404997 | 25858.0 |
| 5-oxoprolinase/urea amidolyase family protein | DU333_21965 | Not Available | Negative | 4404987 - 4405919 | 34488.6 |
| 5-oxoprolinase subunit pxpb | DU333_21970 | Not Available | Negative | 4405913 - 4406569 | 24044.0 |
| nif3-like dinuclear metal center hexameric protein | DU333_21975 | Not Available | Negative | 4406592 - 4407335 | 26894.0 |
| mfs transporter | DU333_21980 | Not Available | Positive | 4407606 - 4409087 | 54084.1 |
| deoxyribodipyrimidine photo-lyase | DU333_21985 | Not Available | Negative | 4409129 - 4410547 | 53906.9 |
| duf1722 domain-containing protein | DU333_21990 | Not Available | Negative | 4410544 - 4411053 | 20205.4 |
| duf2517 family protein | DU333_21995 | Not Available | Negative | 4411154 - 4411360 | 8186.94 |
| k(+)-transporting atpase subunit f | DU333_22000 | Not Available | Positive | 4411673 - 4411762 | 3071.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




